1BUV Hydrolase Hydrolase Inhibitor date Sep 07, 1998
title Crystal Structure Of The Mt1-Mmp-Timp-2 Complex
authors C.Fernandez-Catalan, W.Bode, R.Huber, D.Turk, J.J.Calvete, A.Lichte, H.Tschesche, K.Maskos
compound source
Molecule: Protein (Membrane-Type Matrix Metalloproteinase (Cdmt1-Mmp));
Chain: M
Ec: 3.4.24.80
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Protein (Metalloproteinase Inhibitor (Timp-2))
Chain: T

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: C 1 2 1
R_factor 0.189 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.650 40.100 85.680 90.00 102.30 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand CA, ZN enzyme Hydrolase E.C.3.4.24.80 BRENDA
related structures by homologous chain: 1BQQ, 1RM8, 2TMP
Gene
Ontology
ChainFunctionProcessComponent
M


T


Primary referenceCrystal structure of the complex formed by the membrane type 1-matrix metalloproteinase with the tissue inhibitor of metalloproteinases-2, the soluble progelatinase A receptor., Fernandez-Catalan C, Bode W, Huber R, Turk D, Calvete JJ, Lichte A, Tschesche H, Maskos K, EMBO J 1998 Sep 1;17(17):5238-48. PMID:9724659
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (1buv.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 1BUV
  • CSU: Contacts of Structural Units for 1BUV
  • Likely Quarternary Molecular Structure file(s) for 1BUV
  • Retrieve 1BUV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BUV from S2C, [Save to disk]
  • View 1BUV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BUV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BUV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1buvm_, region M [Jmol] [rasmolscript] [script source]
        - Domain d1buvt_, region T [Jmol] [rasmolscript] [script source]
  • Fold representative 1buv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1buv] [1buv_T] [1buv_M]
  • SWISS-PROT database: [P50281] [P16368]
  • Domain organization of [MMP14_HUMAN] [TIMP2_BOVIN] by SWISSPFAM
  • Domains found in 1BUV: [C345C] [NTR] [ZnMc ] by SMART
  • Other resources with information on 1BUV
  • Community annotation for 1BUV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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