1COK Gene Regulation date May 28, 1999
title Structure Of The C-Terminal Domain Of P73
authors S.W.Chi, A.Ayed, C.H.Arrowsmith
compound source
Molecule: Protein (Second Splice Variant P73)
Chain: A
Fragment: C-Terminal Domain
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Variant: P73alpha
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
related structures by homologous chain: 1DXS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of a conserved C-terminal domain of p73 with structural homology to the SAM domain., Chi SW, Ayed A, Arrowsmith CH, EMBO J 1999 Aug 16;18(16):4438-45. PMID:10449409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (327 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1COK
  • Original NMR restraints for 1COK from PDB
  • Retrieve 1COK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1COK from S2C, [Save to disk]
    • View 1COK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1COK
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1COK, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1coka_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1cok from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cok] [1cok_A]
  • SWISS-PROT database: [O15350]
  • Domain organization of [P73_HUMAN] by SWISSPFAM
  • Domain found in 1COK: [SAM ] by SMART
    • Other resources with information on 1COK
  • Community annotation for 1COK at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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