1D5Z | Immune System Peptide Inhibitor | date | Oct 12, 1999 |
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title | X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptidomim Seb | ||||||||||||||||||
authors | A.Swain, R.Crowther, U.Kammlott | ||||||||||||||||||
compound | source | ||||||||||||||||||
Molecule: Protein (Hla Class II Histocompatibility Antigen) Chain: A Fragment: Dr Alpha Chain, Extracellular Domain Synonym: Hla-Dr4 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Drosophila Melanogaster Expression_system_common: Fruit Fly Expression_system_taxid: 7227 | ||||||||||||||||||
Molecule: Protein (Hla Class II Histocompatibility Antigen) Chain: B Fragment: Dr-4 Beta Chain, Extracellular Domain Synonym: Hla-Dr4 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Drosophila Melanogaster Expression_system_common: Fruit Fly Expression_system_taxid: 7227 | ||||||||||||||||||
Molecule: Protein (Enterotoxin Type B) Chain: C Synonym: Seb, Superantigen |
Organism_scientific: Staphylococcus Aureus Organism_taxid: 1280 | ||||||||||||||||||
Molecule: Protein (Peptidomimetic Inhibitor) Chain: D Engineered: Yes |
Synthetic: Yes Other_details: The Peptide Was Chemically Synthesized. | ||||||||||||||||||
symmetry | Space Group: P 21 21 21 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.00 Å | ||||||||||||||||
ligand | ACE, ALC, NH2, ODA | enzyme |
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related structures | by homologous chain: 1D5M, 1GOZ, 1KLU | ||||||||||||||||||
Gene Ontology |
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Primary reference | Peptide and peptide mimetic inhibitors of antigen presentation by HLA-DR class II MHC molecules. Design, structure-activity relationships, and X-ray crystal structures., Bolin DR, Swain AL, Sarabu R, Berthel SJ, Gillespie P, Huby NJ, Makofske R, Orzechowski L, Perrotta A, Toth K, Cooper JP, Jiang N, Falcioni F, Campbell R, Cox D, Gaizband D, Belunis CJ, Vidovic D, Ito K, Crowther R, Kammlott U, Zhang X, Palermo R, Weber D, Guenot J, Nagy Z, Olson GL, J Med Chem 2000 Jun 1;43(11):2135-48. PMID:10841792 |
Data retrieval |
View 1D5Z in 3D |
Visual 3D analysis of 1D5Z |
Structure-derived information |
- Domain d1d5za2, region A:3-81 [Jmol] [rasmolscript] [script source] - Domain d1d5za1, region A:82-180 [Jmol] [rasmolscript] [script source] - Domain d1d5zb2, region B:1-92 [Jmol] [rasmolscript] [script source] - Domain d1d5zb1, region B:93-190 [Jmol] [rasmolscript] [script source] - Domain d1d5zc2, region C:122-237 [Jmol] [rasmolscript] [script source] - Domain d1d5zc1, region C:2-121 [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |