1DJL	Oxidoreductase	date	Dec 03, 1999
title	The Crystal Structure Of Human Transhydrogenase Domain III W Nadp
authors	S.A.White, S.J.Peak, N.P.Cotton, J.B.Jackson
compound		source
Molecule: Transhydrogenase Diii Chain: A, B Fragment: Residues 837-1086 Ec: 1.6.1.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Heart Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector: Pet11c
symmetry	Space Group: P 41 2 2	R_factor 0.237 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.104 58.104 250.773 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	GOL, NAP, SO4	enzyme	Oxidoreductase E.C.1.6.1.1 BRENDA
related structures	by homologous chain: 1D4O, 1U31
Primary reference	The high-resolution structure of the NADP(H)-binding component (dIII) of proton-translocating transhydrogenase from human heart mitochondria., White SA, Peake SJ, McSweeney S, Leonard G, Cotton NP, Jackson JB, Structure Fold Des 2000 Jan 15;8(1):1-12. PMID:10673423

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (1djl.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 1DJL CSU: Contacts of Structural Units for 1DJL Likely Quarternary Molecular Structure file(s) for 1DJL Retrieve 1DJL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DJL from S2C, [Save to disk]

View 1DJL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DJL

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DJL, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1djla_, region A [Jmol] [rasmolscript] [script source]     - Domain d1djlb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1djl_A] [1djl] [1djl_B] SWISS-PROT database: [Q13423] Domain organization of [NNTM_HUMAN] by SWISSPFAM

Other resources with information on 1DJL

Community annotation for 1DJL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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