1DZC Cell Cycle date Feb 24, 2000
title High Resolution Structure Of Acidic Fibroblast Growth Factor. Mutant Fgf-4-Ala-(23-154), 24 Nmr Structures
authors R.M.Lozano, A.Pineda-Lucena, C.Gonzalez, M.A.Jimenez, P.Cuevas, M.Redondo-Horcajo, J.M.Sanz, M.Rico, G.Gimenez-Gallego
compound source
Molecule: Fibroblast Growth Factor 1
Chain: A
Fragment: Residues 25-155
Synonym: Fgf-1, Acidic Fibroblast Growth Factor, Afgf, Ecgf Endothelial Cell Growth Factor, Heparin-Binding Growth Fac
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pmg624a
methodSolution NMR
related structures by homologous chain: 1DZD
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference1H NMR structural characterization of a nonmitogenic, vasodilatory, ischemia-protector and neuromodulatory acidic fibroblast growth factor., Lozano RM, Pineda-Lucena A, Gonzalez C, Angeles Jimenez M, Cuevas P, Redondo-Horcajo M, Sanz JM, Rico M, Gimenez-Gallego G, Biochemistry 2000 May 2;39(17):4982-93. PMID:10819962
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (414 Kb) [Save to disk]
  • Biological Unit Coordinates (1dzc.pdb1.gz) 16 Kb
  • CSU: Contacts of Structural Units for 1DZC
  • Original NMR restraints for 1DZC from PDB
  • Retrieve 1DZC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DZC from S2C, [Save to disk]
    • View 1DZC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1DZC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DZC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dzca_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dzc_A] [1dzc]
  • SWISS-PROT database: [P05230]
  • Domain organization of [FGF1_HUMAN] by SWISSPFAM
  • Domain found in 1DZC: [FGF ] by SMART
    • Other resources with information on 1DZC
  • Community annotation for 1DZC at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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