1DZD Growth Factor date Feb 24, 2000
title High Resolution Structure Of Acidic Fibroblast Growth Factor (27-154), 24 Nmr Structures
authors R.M.Lozano, A.Pineda-Lucena, C.Gonzalez, M.A.Jimenez, P.Cuevas, M.Redondo-Horcajo, J.M.Sanz, M.Rico, G.Gimenez-Gallego
compound source
Molecule: Acidic Fibroblast Growth Factor
Chain: A
Fragment: Residues 27-154
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pmg62
methodSolution NMR
related structures by homologous chain: 1DZC, 1FMM
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference1H NMR structural characterization of a nonmitogenic, vasodilatory, ischemia-protector and neuromodulatory acidic fibroblast growth factor., Lozano RM, Pineda-Lucena A, Gonzalez C, Angeles Jimenez M, Cuevas P, Redondo-Horcajo M, Sanz JM, Rico M, Gimenez-Gallego G, Biochemistry 2000 May 2;39(17):4982-93. PMID:10819962
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (402 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1DZD
  • Original NMR restraints for 1DZD from PDB
  • Retrieve 1DZD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DZD from S2C, [Save to disk]
    • View 1DZD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1DZD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DZD, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dzda_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dzd_A] [1dzd]
  • SWISS-PROT database: [P05230]
  • Domain organization of [FGF1_HUMAN] by SWISSPFAM
  • Domain found in 1DZD: [FGF ] by SMART
    • Other resources with information on 1DZD
  • Community annotation for 1DZD at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1DZD from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science