1E31 Apoptosis Inhibitor date Jun 04, 2000
title Survivin Dimer H. Sapiens
authors L.Chantalat, D.A.Skoufias, R.L.Margolis, O.Dideberg
compound source
Molecule: Apoptosis Inhibitor Survivin
Chain: A, B
Synonym: Iap4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 1 2 1
R_factor 0.235 R_Free 0.270
length a length b length c angle alpha angle beta angle gamma
82.220 71.050 89.450 90.00 96.12 90.00
method X-Ray Diffractionresolution 2.71 Å
ligand CO, ZN enzyme
related structures by homologous chain: 1F3H, 1M4M
A, B

Primary referenceCrystal structure of human survivin reveals a bow tie-shaped dimer with two unusual alpha-helical extensions., Chantalat L, Skoufias DA, Kleman JP, Jung B, Dideberg O, Margolis RL, Mol Cell 2000 Jul;6(1):183-9. PMID:10949039
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (1e31.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1E31
  • CSU: Contacts of Structural Units for 1E31
  • Likely Quarternary Molecular Structure file(s) for 1E31
  • Retrieve 1E31 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E31 from S2C, [Save to disk]
  • View 1E31 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Visual 3D analysis of 1E31
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1E31, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e31a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1e31b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1e31 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e31] [1e31_A] [1e31_B]
  • SWISS-PROT database: [O15392]
  • Domain organization of [BIRC5_HUMAN] by SWISSPFAM
  • Domain found in 1E31: [BIR ] by SMART
  • Other resources with information on 1E31
  • Community annotation for 1E31 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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