1E3C Hydrolase date Jun 13, 2000
title Crystal Structure Of An Arylsulfatase A Mutant C69s Soaked I Synthetic Substrate
authors R.Von Buelow, B.Schmidt, T.Dierks, K.Von Figura, I.Uson
compound source
Molecule: Arylsulfatase A
Chain: P
Synonym: Asa,Cerebroside-Sulfatase
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Testis
Cellular_location: Lysosome
Gene: Arsa
Expression_system: Mus Musculus
Expression_system_taxid: 10090
Expression_system_cell_line: Mef
symmetry Space Group: I 4 2 2
R_factor 0.173 R_Free 0.243
length a length b length c angle alpha angle beta angle gamma
131.800 131.800 192.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.65 Å
ligand MG, NAG, NDG enzyme Hydrolase E.C. BRENDA
related structures by homologous chain: 1E33, 1N2K

Primary referenceCrystal structure of an enzyme-substrate complex provides insight into the interaction between human arylsulfatase A and its substrates during catalysis., von Bulow R, Schmidt B, Dierks T, von Figura K, Uson I, J Mol Biol 2001 Jan 12;305(2):269-77. PMID:11124905
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (1e3c.pdb1.gz) 153 Kb
  • LPC: Ligand-Protein Contacts for 1E3C
  • CSU: Contacts of Structural Units for 1E3C
  • Likely Quarternary Molecular Structure file(s) for 1E3C
  • Structure Factors (367 Kb)
  • Retrieve 1E3C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E3C from S2C, [Save to disk]
  • Re-refined 1e3c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1E3C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E3C
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1E3C, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e3cp_, region P [Jmol] [rasmolscript] [script source]
  • Fold representative 1e3c from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e3c] [1e3c_P]
  • SWISS-PROT database: [P15289]
  • Domain organization of [ARSA_HUMAN] by SWISSPFAM
  • Other resources with information on 1E3C
  • Community annotation for 1E3C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science