1E33	Hydrolase	date	Jun 06, 2000
title	Crystal Structure Of An Arylsulfatase A Mutant P426l
authors	R.Von Buelow, B.Schmidt, T.Dierks, K.Von Figura, I.Uson
compound		source
Molecule: Arylsulfatase A Chain: P Synonym: Cerebroside-3-Sulfate-Sulfatase Ec: 3.1.6.8 Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Testis Cellular_location: Lysosome Plasmid: Pmpsveh Gene: Arsa
symmetry	Space Group: I 4 2 2	R_factor 0.185 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 131.400 131.400 192.000 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	DDZ, MG, NDG	enzyme	Hydrolase E.C.3.1.6.8 BRENDA
related structures	by homologous chain: 1E1Z, 1E3C
Gene Ontology	Chain Function Process Component P arylsulfatase activity cerebroside-sulfatase activi... calcium ion binding sulfuric ester hydrolase act... hydrolase activity metal ion binding sphingolipid metabolic proce... glycosphingolipid metabolic ... post-translational protein m... cellular protein metabolic p... small molecule metabolic pro... lysosome endoplasmic reticulum lumen lysosomal lumen
Primary reference	Defective oligomerization of arylsulfatase a as a cause of its instability in lysosomes and metachromatic leukodystrophy., von Bulow R, Schmidt B, Dierks T, Schwabauer N, Schilling K, Weber E, Uson I, von Figura K, J Biol Chem. 2002 Mar 15;277(11):9455-61. Epub 2002 Jan 2. PMID:11777924

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk] Biological Unit Coordinates (1e33.pdb1.gz) 152 Kb LPC: Ligand-Protein Contacts for 1E33 CSU: Contacts of Structural Units for 1E33 Likely Quarternary Molecular Structure file(s) for 1E33 Structure Factors (429 Kb) Retrieve 1E33 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1E33 from S2C, [Save to disk] Re-refined 1e33 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1E33 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 1E33

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1E33, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1e33p_, region P [Jmol] [rasmolscript] [script source] Fold representative 1e33 from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1e33_P] SWISS-PROT database: [P15289] Domain organization of [ARSA_HUMAN] by SWISSPFAM Alignments of the sequence of 1E33 with the sequences similar proteins can be viewed for 1E33's classification [ARSA_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [ARSA_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 1E33

Community annotation for 1E33 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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