1E91 Eukaryotic Transcriptional Regulation date Oct 04, 2000
title Structure Of The Complex Of The Mad1-Sin3b Interaction Domai
authors C.A.E.M.Spronk, M.Tessari, A.M.Kaan, J.F.A.Jansen, M.Vermeulen, H.G.Stunnenberg, G.W.Vuister
compound source
Molecule: Paired Amphipathic Helix Protein Sin3b
Chain: A
Fragment: Pah2 Domain
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Sin3b
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex2t
Expression_system_gene: Sin3b

Molecule: Mad Protein (Max Dimerizer)
Chain: B
Fragment: Sin Interaction Domain
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
note 1E91 is a representative structure
related structures by homologous chain: 1PD7
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Mad1-Sin3B interaction involves a novel helical fold., Spronk CA, Tessari M, Kaan AM, Jansen JF, Vermeulen M, Stunnenberg HG, Vuister GW, Nat Struct Biol 2000 Dec;7(12):1100-4. PMID:11101889
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (540 Kb) [Save to disk]
  • Biological Unit Coordinates (1e91.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1E91
  • Original NMR restraints for 1E91 from PDB
  • Retrieve 1E91 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E91 from S2C, [Save to disk]
  • View 1E91 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E91
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1E91, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e91a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1e91 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e91] [1e91_B] [1e91_A]
  • SWISS-PROT database: [Q05195] [Q62141]
  • Domain organization of [MAD1_HUMAN] [SIN3B_MOUSE] by SWISSPFAM
  • Other resources with information on 1E91
  • Community annotation for 1E91 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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