1EXU Immune System date May 04, 2000
title Crystal Structure Of The Human Mhc-Related Fc Receptor
authors A.P.West Jr., P.J.Bjorkman
compound source
Molecule: Igg Receptor Fcrn Large Subunit P51
Chain: A
Fragment: Extracellular Ligand Binding Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Placenta
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbj5-Gs

Molecule: Beta-2-Microglobulin
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbj1
symmetry Space Group: P 43 21 2
R_factor 0.197 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.387 66.387 221.813 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand BME enzyme
related structures by homologous chain: 1CD1, 1CG9, 1I1A, 3FRU
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

  • Primary referenceCrystal structure and immunoglobulin G binding properties of the human major histocompatibility complex-related Fc receptor(,)., West AP Jr, Bjorkman PJ, Biochemistry 2000 Aug 15;39(32):9698-708. PMID:10933786
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (1exu.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1EXU
  • CSU: Contacts of Structural Units for 1EXU
  • Likely Quarternary Molecular Structure file(s) for 1EXU
  • Retrieve 1EXU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EXU from S2C, [Save to disk]
  • View 1EXU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EXU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EXU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1exua1, region A:177-267 [Jmol] [rasmolscript] [script source]
        - Domain d1exua2, region A:4-176 [Jmol] [rasmolscript] [script source]
        - Domain d1exub_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1exu_A] [1exu] [1exu_B]
  • SWISS-PROT database: [P61769] [P55899]
  • Domain organization of [B2MG_HUMAN] [FCGRN_HUMAN] by SWISSPFAM
  • Domain found in 1EXU: [IGc1 ] by SMART
  • Other resources with information on 1EXU
  • Community annotation for 1EXU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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