1CG9 Mhc Class I date Mar 25, 1999
title Complex Recognition Of The Supertypic Bw6-Determinant On Hla Molecules By The Monoclonal Antibody Sfr8-B6
authors R.Menssen, P.Orth, A.Ziegler, W.Saenger
compound source
Molecule: Protein (Hla Class I Histocompatibility Antigen, 3501 Alpha Chain);
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: E. Coli Xa90
Expression_system_cellular_location: Cytoplasm
Other_details: Synthetic Gene

Molecule: Protein (Beta-2-Microglobulin)
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: E. Coli Xa90
Expression_system_cellular_location: Cytoplasm
Other_details: Synthetic Gene

Molecule: Protein (Ebna-6 Nuclear Protein (Ebna-3c) (Ebna-4
Chain: C
Engineered: Yes
Mutation: Yes
Other_details: Peptide From Ebna3c-Protein From Ebv

Synthetic: Yes
Other_details: This Peptide Was Chemically Synthesized. The Of This Peptide Is Found In The Epstein-Barr Virus (Strain
symmetry Space Group: C 2 2 21
R_factor 0.201 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.550 181.530 141.030 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
related structures by homologous chain: 1EXU, 1FFO, 1QQD
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (1cg9.pdb1.gz) 67 Kb
  • CSU: Contacts of Structural Units for 1CG9
  • Likely Quarternary Molecular Structure file(s) for 1CG9
  • Structure Factors (151 Kb)
  • Retrieve 1CG9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CG9 from S2C, [Save to disk]
  • Re-refined 1cg9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CG9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CG9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CG9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cg9a2, region A:1-181 [Jmol] [rasmolscript] [script source]
        - Domain d1cg9a1, region A:182-277 [Jmol] [rasmolscript] [script source]
        - Domain d1cg9b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cg9] [1cg9_A] [1cg9_C] [1cg9_B]
  • SWISS-PROT database: [P30685] [P61769]
  • Domain organization of [1B35_HUMAN] [B2MG_HUMAN] by SWISSPFAM
  • Domain found in 1CG9: [IGc1 ] by SMART
  • Other resources with information on 1CG9
  • Community annotation for 1CG9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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