1FCZ Gene Regulation date Jul 19, 2000
title Isotype Selectivity Of The Human Retinoic Acid Nuclear Recep The Complex With The Panagonist Retinoid Bms181156
authors B.P.Klaholz, A.Mitschler, D.Moras, Structural Proteomics In Eur (Spine)
compound source
Molecule: Retinoic Acid Receptor Gamma-1
Chain: A
Fragment: Ligand Binding Domain
Synonym: Rar-Gamma-1
Engineered: Yes
Other_details: Complexed With Bms181156, Residue 156
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
symmetry Space Group: P 41 21 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.884 59.884 155.805 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.38 Å
ligand 156, LMU BindingDB enzyme
related structures by homologous chain: 1FCX, 1FD0
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for isotype selectivity of the human retinoic acid nuclear receptor., Klaholz BP, Mitschler A, Moras D, J Mol Biol 2000 Sep 8;302(1):155-70. PMID:10964567
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (1fcz.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1FCZ
  • CSU: Contacts of Structural Units for 1FCZ
  • Likely Quarternary Molecular Structure file(s) for 1FCZ
  • Structure Factors (398 Kb)
  • Retrieve 1FCZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FCZ from S2C, [Save to disk]
  • Re-refined 1fcz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1FCZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FCZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1FCZ from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FCZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fcza_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fcz_A] [1fcz]
  • SWISS-PROT database: [P13631]
  • Domain organization of [RARG_HUMAN] by SWISSPFAM
  • Domain found in 1FCZ: [HOLI ] by SMART
  • Other resources with information on 1FCZ
  • Community annotation for 1FCZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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