1FHB Electron Transport date Jun 16, 1995
title Three-Dimensional Solution Structure Of The Cyanide Adduct O Met80ala Variant Of Saccharomyces Cerevisiae Iso-1-Cytochro Identification Of Ligand-Residue Interactions In The Distal Cavity
authors L.Banci, I.Bertini, K.L.Bren, H.B.Gray, P.Sompornpisut, P.Turano
compound source
Molecule: Ferricytochrome C
Chain: A
Synonym: Met80ala-Iso-1-Ferricytochrome C (Isozyme 1)
Engineered: Yes
Mutation: Yes
Other_details: Cyanide Adduct Of Ala 80, Isozyme 1, Oxidize
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Strain: Gm3c2
Variant: H39q, M80a, C102s
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
Expression_system_plasmid: Yep213-Leu58hiscyc1
Expression_system_gene: Yeast Iso-1-Cytochrome C (Cyc1)
methodSolution NMR
ligand CYN, HEM, M3L enzyme
related structures by homologous chain: 1KYO, 1YFC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional solution structure of the cyanide adduct of a Met80Ala variant of Saccharomyces cerevisiae iso-1-cytochrome c. Identification of ligand-residue interactions in the distal heme cavity., Banci L, Bertini I, Bren KL, Gray HB, Sompornpisut P, Turano P, Biochemistry 1995 Sep 12;34(36):11385-98. PMID:7547866
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (258 Kb) [Save to disk]
  • Biological Unit Coordinates (1fhb.pdb1.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 1FHB
  • CSU: Contacts of Structural Units for 1FHB
  • Retrieve 1FHB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FHB from S2C, [Save to disk]
  • View 1FHB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FHB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FHB, from MSDmotif at EBI
  • Genome occurence of 1FHB's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fhb__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fhb] [1fhb_A]
  • SWISS-PROT database: [P00044]
  • Domain organization of [CYC1_YEAST] by SWISSPFAM
  • Other resources with information on 1FHB
  • Community annotation for 1FHB at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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