1GVE Oxidoreductase date Feb 08, 2002
title Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver
authors E.Kozma, E.Brown, E.M.Ellis, A.J.Lapthorn
compound source
Molecule: Aflatoxin B1 Aldehyde Reductase Member 3
Chain: A, B
Synonym: Aflatoxin B1 Aldehyde Reductase, Aflatoxin Aldehyd Reductase, Akr7a1, Afb1-Ar, B1 Aldehyde Reductase Member 1,
Ec: 1.-.-.-
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Liver
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pet15b
symmetry Space Group: C 1 2 1
R_factor 0.158 R_Free 0.180
crystal
cell
length a length b length c angle alpha angle beta angle gamma
125.540 64.680 112.840 90.00 91.03 90.00
method X-Ray Diffractionresolution 1.38 Å
ligand CIT, GOL, NAP enzyme Oxidoreductase E.C.1 BRENDA
note 1GVE is a representative structure
related structures by homologous chain: 2BP1
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of rat liver AKR7A1. A dimeric member of the aldo-keto reductase superfamily., Kozma E, Brown E, Ellis EM, Lapthorn AJ, J Biol Chem 2002 May 3;277(18):16285-93. PMID:11839745
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (222 Kb) [Save to disk]
  • Biological Unit Coordinates (1gve.pdb1.gz) 215 Kb
  • LPC: Ligand-Protein Contacts for 1GVE
  • CSU: Contacts of Structural Units for 1GVE
  • Likely Quarternary Molecular Structure file(s) for 1GVE
  • Retrieve 1GVE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GVE from S2C, [Save to disk]
  • View 1GVE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GVE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1GVE 1GVEA 1GVEB from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GVE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gvea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1gveb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gve] [1gve_B] [1gve_A]
  • SWISS-PROT database: [P38918]
  • Domain organization of [ARK73_RAT] by SWISSPFAM
  • Other resources with information on 1GVE
  • Community annotation for 1GVE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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