1GVL	Hydrolase	date	Feb 14, 2002
title	Human Prokallikrein 6 (Hk6) Prozyme Proprotease M Proneur
authors	F.X.Gomis-Ruth, A.Bayes, G.Sotiropoulou, G.Pampalakis, T.Tsetsen V.Villegas, F.X.Aviles, M.Coll
compound		source
Molecule: Kallikrein 6 Chain: A Synonym: Human Prokallikrein 6, Protease M, Neurosin, Zyme Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_strain: Ppic9
symmetry	Space Group: P 21 21 21	R_factor 0.185 R_Free 0.225
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.000 66.400 71.200 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
related structures	by homologous chain: 1L2E
Gene Ontology	Chain Function Process Component A
Primary reference	The structure of human prokallikrein 6 reveals a novel activation mechanism for the kallikrein family., Gomis-Ruth FX, Bayes A, Sotiropoulou G, Pampalakis G, Tsetsenis T, Villegas V, Aviles FX, Coll M, J Biol Chem 2002 Jul 26;277(30):27273-81. PMID:12016211

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk] Biological Unit Coordinates (1gvl.pdb1.gz) 38 Kb CSU: Contacts of Structural Units for 1GVL Likely Quarternary Molecular Structure file(s) for 1GVL Retrieve 1GVL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GVL from S2C, [Save to disk]

View 1GVL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GVL

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GVL, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gvla_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gvl_A] [1gvl] SWISS-PROT database: [Q92876] Domain organization of [KLK6_HUMAN] by SWISSPFAM Domain found in 1GVL: [Tryp_SPc ] by SMART

Other resources with information on 1GVL

Community annotation for 1GVL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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