1H78 STRUCTURAL BASIS FOR ALLOSTERIC SUBSTRATE SPECIFICITY REGULATION IN CLASS III RIBONUCLEOTIDE REDUCTASES: NRDD IN COMPLEX WITH DCTP. date
authors Larsson, K.M., Andersson, J., Sjoeberg, B.M., Nordlund, P., Logan, D.T.
compound source
symmetry
R_factor
R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand DCP, MG enzyme
related structures by homologous chain: 1H7A, 1H7B
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for allosteric substrate specificity regulation in anaerobic ribonucleotide reductases., Larsson KM, Andersson J, Sjoberg BM, Nordlund P, Logan DT, Structure (Camb) 2001 Aug;9(8):739-50. PMID:11587648
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (1h78.pdb1.gz) 176 Kb
  • LPC: Ligand-Protein Contacts for 1H78
  • CSU: Contacts of Structural Units for 1H78
  • Likely Quarternary Molecular Structure file(s) for 1H78
  • Retrieve 1H78 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H78 from S2C, [Save to disk]
  • View 1H78 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H78
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1H78, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h78a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1h78 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h78_A] [1h78]
  • SWISS-PROT database: [P07071]
  • Domain organization of [NRDD_BPT4] by SWISSPFAM
  • Other resources with information on 1H78
  • Community annotation for 1H78 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science