1H7B Structural basis for allosteric substrate specificity regulation in class III ribonucleotide reductases, native NRDD date
authors Larsson, K.M., Andersson, J., Sjoeberg, B.M., Nordlund, P., Logan, D.T.
compound source
symmetry
R_factor
R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.45
ligand PO4 enzyme
related structures by homologous chain: 1H78, 1HK8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for allosteric substrate specificity regulation in anaerobic ribonucleotide reductases., Larsson KM, Andersson J, Sjoberg BM, Nordlund P, Logan DT, Structure (Camb) 2001 Aug;9(8):739-50. PMID:11587648
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (1h7b.pdb1.gz) 174 Kb
  • LPC: Ligand-Protein Contacts for 1H7B
  • CSU: Contacts of Structural Units for 1H7B
  • Likely Quarternary Molecular Structure file(s) for 1H7B
  • Structure Factors (306 Kb)
  • Retrieve 1H7B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H7B from S2C, [Save to disk]
  • Re-refined 1h7b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1H7B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1H7B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1H7B, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h7ba_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h7b_A] [1h7b]
  • SWISS-PROT database: [P07071]
  • Domain organization of [NRDD_BPT4] by SWISSPFAM
    • Other resources with information on 1H7B
  • Community annotation for 1H7B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science