1HFS	Hydrolase	date	Feb 13, 1997
title	Crystal Structure Of The Catalytic Domain Of Human Fibroblas Stromelysin-1 Inhibited With The N-Carboxy-Alkyl Inhibitor
authors	J.W.Becker
compound		source
Molecule: Stromelysin-1 Chain: A Synonym: Matrix Metalloprotease-3, Proteoglycanase Ec: 3.4.24.17 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.189 R_Free 0.217
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.140 85.350 55.260 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	CA, L04, ZN BindingDB	enzyme	Hydrolase E.C.3.4.24.17 BRENDA
related structures	by homologous chain: 1CIZ, 1USN
Gene Ontology	Chain Function Process Component A
Primary reference	Inhibition of stromelysin-1 (MMP-3) by P1'-biphenylylethyl carboxyalkyl dipeptides., Esser CK, Bugianesi RL, Caldwell CG, Chapman KT, Durette PL, Girotra NN, Kopka IE, Lanza TJ, Levorse DA, MacCoss M, Owens KA, Ponpipom MM, Simeone JP, Harrison RK, Niedzwiecki L, Becker JW, Marcy AI, Axel MG, Christen AJ, McDonnell J, Moore VL, Olszewski JM, Saphos C, Visco DM, Hagmann WK, et al., J Med Chem 1997 Mar 14;40(6):1026-40. PMID:9083493

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (1hfs.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 1HFS CSU: Contacts of Structural Units for 1HFS Likely Quarternary Molecular Structure file(s) for 1HFS Structure Factors (292 Kb) Retrieve 1HFS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HFS from S2C, [Save to disk] Re-refined 1hfs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1HFS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HFS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HFS, from MSDmotif at EBI Genome occurence of 1HFS's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hfs__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hfs_A] [1hfs] SWISS-PROT database: [P08254] Domain organization of [MMP3_HUMAN] by SWISSPFAM Domain found in 1HFS: [ZnMc ] by SMART

Other resources with information on 1HFS

Community annotation for 1HFS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1HFS from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---