1USN Hydrolase date Jun 09, 1998
title Crystal Structure Of The Catalytic Domain Of Human Fibroblas Stromelysin-1 Inhibited With Thiadiazole Inhibitor Pnu-1423
authors B.C.Finzel, G.L.Bryant Junior, E.T.Baldwin
compound source
Molecule: Stromelysin-1
Chain: A
Fragment: Catalytic Domain Residues 83 - 247
Synonym: Matrix Metalloproteinase-3, Proteoglycanase
Ec: 3.4.24.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell: Fibroblast
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
symmetry Space Group: H 3 2
R_factor 0.189 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.120 72.120 192.060 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand CA, IN9, ZN BindingDB enzyme Hydrolase E.C.3.4.24.17 BRENDA
related structures by homologous chain: 1CAQ, 1HFS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural characterizations of nonpeptidic thiadiazole inhibitors of matrix metalloproteinases reveal the basis for stromelysin selectivity., Finzel BC, Baldwin ET, Bryant GL Jr, Hess GF, Wilks JW, Trepod CM, Mott JE, Marshall VP, Petzold GL, Poorman RA, O'Sullivan TJ, Schostarez HJ, Mitchell MA, Protein Sci 1998 Oct;7(10):2118-26. PMID:9792098
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1usn.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (1usn.pdb2.gz) 88 Kb
  • Biological Unit Coordinates (1usn.pdb3.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 1USN
  • CSU: Contacts of Structural Units for 1USN
  • Likely Quarternary Molecular Structure file(s) for 1USN
  • Retrieve 1USN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1USN from S2C, [Save to disk]
  • View 1USN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1USN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1USN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1usn__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1usn_A] [1usn]
  • SWISS-PROT database: [P08254]
  • Domain organization of [MMP3_HUMAN] by SWISSPFAM
  • Domain found in 1USN: [ZnMc ] by SMART
  • Other resources with information on 1USN
  • Community annotation for 1USN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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