1HH8 Cell Cycle date Dec 21, 2000
title The Active N-Terminal Region Of P67phox: Structure At 1.8 Angstrom Resolution And Biochemical Characterizations Of The A128v Mutant Implicated In Chronic Granulomatous Disease
authors S.Grizot, F.Fieschi, M.C.Dagher, E.Pebay-Peyroula
compound source
Molecule: Neutrophil Cytosol Factor 2
Chain: A
Fragment: N-Terminal Domain, Residues 1-213
Synonym: P67phox, Ncf-2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell: Neutrophil
Cellular_location: Cytoplasm
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
symmetry Space Group: P 31
R_factor 0.182 R_Free 0.204
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.670 67.670 50.200 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.8 Å
ligand FLC enzyme
related structures by homologous chain: 1E96
Primary referenceThe active N-terminal region of p67phox. Structure at 1.8 A resolution and biochemical characterizations of the A128V mutant implicated in chronic granulomatous disease., Grizot S, Fieschi F, Dagher MC, Pebay-Peyroula E, J Biol Chem 2001 Jun 15;276(24):21627-31. PMID:11262407
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1hh8.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1HH8
  • CSU: Contacts of Structural Units for 1HH8
  • Likely Quarternary Molecular Structure file(s) for 1HH8
  • Structure Factors (167 Kb)
  • Retrieve 1HH8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HH8 from S2C, [Save to disk]
  • Re-refined 1hh8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HH8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HH8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1HH8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hh8a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1hh8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hh8_A] [1hh8]
  • SWISS-PROT database: [P19878]
  • Domain organization of [NCF2_HUMAN] by SWISSPFAM
  • Domain found in 1HH8: [TPR ] by SMART
  • Other resources with information on 1HH8
  • Community annotation for 1HH8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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