1HIM Immunoglobulin date Jul 08, 1992
title Structural Evidence For Induced Fit As A Mechanism For Antib Antigen Recognition
authors U.Schulze-Gahmen, I.A.Wilson
compound source
Molecule: Igg2a-Kappa 179 Fab (Light Chain)
Chain: H, J
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090

Molecule: Igg2a-Kappa 179 Fab (Heavy Chain)
Chain: L, M
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090

Molecule: Influenza Hemagglutinin Ha1 (Strain X47) (Residue 108);
Chain: P
Engineered: Yes

Synthetic: Yes

Molecule: Influenza Hemagglutinin Ha1 (Strain X47) (Residue 108);
Chain: R
Engineered: Yes

Synthetic: Yes
symmetry Space Group: P 1
R_factor 0.200 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.080 67.070 73.240 89.90 101.80 96.50
method X-Ray Diffractionresolution 2.90 Å
ligand NH2 enzyme
related structures by homologous chain: 1FH5, 1NLD, 1TY6
Primary referenceStructural evidence for induced fit as a mechanism for antibody-antigen recognition., Rini JM, Schulze-Gahmen U, Wilson IA, Science. 1992 Feb 21;255(5047):959-65. PMID:1546293
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (1him.pdb1.gz) 70 Kb
  • Biological Unit Coordinates (1him.pdb2.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 1HIM
  • CSU: Contacts of Structural Units for 1HIM
  • Likely Quarternary Molecular Structure file(s) for 1HIM
  • Retrieve 1HIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HIM from S2C, [Save to disk]
  • View 1HIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HIM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HIM, from MSDmotif at EBI
  • Genome occurence of 1HIM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1himh1, region H:1-108 [Jmol] [rasmolscript] [script source]
        - Domain d1himh2, region H:109-211 [Jmol] [rasmolscript] [script source]
        - Domain d1himj1, region J:1-108 [Jmol] [rasmolscript] [script source]
        - Domain d1himj2, region J:109-211 [Jmol] [rasmolscript] [script source]
        - Domain d1himl1, region L:1-112 [Jmol] [rasmolscript] [script source]
        - Domain d1himl2, region L:113-228 [Jmol] [rasmolscript] [script source]
        - Domain d1himm1, region M:1-112 [Jmol] [rasmolscript] [script source]
        - Domain d1himm2, region M:113-228 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1him_J] [1him_P] [1him_R] [1him_H] [1him] [1him_L] [1him_M]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 1HIM: [IG_like] [IGv ] by SMART
  • Other resources with information on 1HIM
  • Community annotation for 1HIM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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