1HMP Transferase (Glycosyltransferase) date Jun 03, 1994
title The Crystal Structure Of Human Hypoxanthine-Guanine Phosphoribosyltransferase With Bound Gmp
authors J.C.Eads, G.Scapin, Y.Xu, C.Grubmeyer, J.C.Sacchettini
compound source
Molecule: Hypoxanthine Guanine Phosphoribosyl-Transferase
Chain: A, B
Ec: 2.4.2.8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 2
R_factor 0.186 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
129.500 66.450 52.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand 5GP BindingDB enzyme Transferase E.C.2.4.2.8 BRENDA
related structures by homologous chain: 1BZY, 1D6N
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of human hypoxanthine-guanine phosphoribosyltransferase with bound GMP., Eads JC, Scapin G, Xu Y, Grubmeyer C, Sacchettini JC, Cell 1994 Jul 29;78(2):325-34. PMID:8044844
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (1hmp.pdb1.gz) 139 Kb
  • LPC: Ligand-Protein Contacts for 1HMP
  • CSU: Contacts of Structural Units for 1HMP
  • Likely Quarternary Molecular Structure file(s) for 1HMP
  • Retrieve 1HMP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HMP from S2C, [Save to disk]
  • View 1HMP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HMP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1HMP, from MSDmotif at EBI
  • Genome occurence of 1HMP's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hmpa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hmpb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1hmp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hmp] [1hmp_B] [1hmp_A]
  • SWISS-PROT database: [P00492]
  • Domain organization of [HPRT_HUMAN] by SWISSPFAM
  • Other resources with information on 1HMP
  • Community annotation for 1HMP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science