1IIL Growth Factor Growth Factor Receptor date Apr 23, 2001
title Crystal Structure Of Pro253arg Apert Mutant Fgf Receptor 2 (Fgfr2) In Complex With Fgf2
authors O.A.Ibrahimi, A.V.Eliseenkova, A.N.Plotnikov, D.M.Ornitz, M.Mohammadi
compound source
Molecule: Heparin-Binding Growth Factor 2
Chain: A, B, C, D
Synonym: Fgf2, Hbgf-2, Basic Fibroblast Growth Factor, Bfgf;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a

Molecule: Fibroblast Growth Factor Receptor 2
Chain: E, F, G, H
Fragment: Extracellular Ligand Binding Domain Consisting Of Ig-Like Domains II (D2) And III (D3), Residues 147-366;
Synonym: Fgfr2, Keratinocyte Growth Factor Receptor
Ec: 2.7.1.112
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 1
R_factor 0.237 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.796 72.490 89.919 90.01 89.82 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1DJS, 1EV2, 2BFH
Primary referenceStructural basis for fibroblast growth factor receptor 2 activation in Apert syndrome., Ibrahimi OA, Eliseenkova AV, Plotnikov AN, Yu K, Ornitz DM, Mohammadi M, Proc Natl Acad Sci U S A 2001 Jun 19;98(13):7182-7. PMID:11390973
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (220 Kb) [Save to disk]
  • Biological Unit Coordinates (1iil.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (1iil.pdb2.gz) 56 Kb
  • Biological Unit Coordinates (1iil.pdb3.gz) 58 Kb
  • Biological Unit Coordinates (1iil.pdb4.gz) 58 Kb
  • CSU: Contacts of Structural Units for 1IIL
  • Likely Quarternary Molecular Structure file(s) for 1IIL
  • Retrieve 1IIL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IIL from S2C, [Save to disk]
  • View 1IIL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IIL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IIL, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1iila_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1iilb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1iilc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1iild_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1iile1, region E:150-250 [Jmol] [rasmolscript] [script source]
        - Domain d1iile2, region E:251-361 [Jmol] [rasmolscript] [script source]
        - Domain d1iilf1, region F:150-250 [Jmol] [rasmolscript] [script source]
        - Domain d1iilf2, region F:251-361 [Jmol] [rasmolscript] [script source]
        - Domain d1iilg1, region G:150-250 [Jmol] [rasmolscript] [script source]
        - Domain d1iilg2, region G:251-364 [Jmol] [rasmolscript] [script source]
        - Domain d1iilh1, region H:150-250 [Jmol] [rasmolscript] [script source]
        - Domain d1iilh2, region H:251-364 [Jmol] [rasmolscript] [script source]
  • Fold representative 1iil from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1iil_F] [1iil_C] [1iil_H] [1iil] [1iil_D] [1iil_G] [1iil_A] [1iil_E] [1iil_B]
  • SWISS-PROT database: [P09038] [P21802]
  • Domain organization of [FGF2_HUMAN] [FGFR2_HUMAN] by SWISSPFAM
  • Domains found in 1IIL: [FGF] [IGc2 ] by SMART
  • Other resources with information on 1IIL
  • Community annotation for 1IIL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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