1J04	Transferase	date	Oct 30, 2002
title	Structural Mechanism Of Enzyme Mistargeting In Hereditary Ki Disease In Vitro
authors	X.Zhang, S.Djordjevic, M.Bartlam, S.Ye, Z.Rao, C.J.Danpure
compound		source
Molecule: Alanine--Glyoxylate Aminotransferase Chain: A Synonym: Serine--Pyruvate Aminotransferase Ec: 2.6.1.51, 2.6.1.44 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm109
symmetry	Space Group: P 41 21 2	R_factor 0.223 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.491 89.491 142.823 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	AOA, GOL, LLP	enzyme	Transferase E.C.2.6.1.51 BRENDA
related structures	by homologous chain: 1H0C
Gene Ontology	Chain Function Process Component A
Primary reference	Structural implications of a G170R mutation of alanine:glyoxylate aminotransferase that is associated with peroxisome-to-mitochondrion mistargeting., Djordjevic S, Zhang X, Bartlam M, Ye S, Rao Z, Danpure CJ, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Mar 1;66(Pt, 3):233-6. Epub 2010 Feb 23. PMID:20208150

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (1j04.pdb1.gz) 63 Kb Biological Unit Coordinates (1j04.pdb2.gz) 125 Kb LPC: Ligand-Protein Contacts for 1J04 CSU: Contacts of Structural Units for 1J04 Likely Quarternary Molecular Structure file(s) for 1J04 Structure Factors (205 Kb) Retrieve 1J04 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1J04 from S2C, [Save to disk] Re-refined 1j04 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1J04 in 3D

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Visual 3D analysis of 1J04

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1J04, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1j04a_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1j04_A] [1j04] SWISS-PROT database: [P21549] Domain organization of [SPYA_HUMAN] by SWISSPFAM

Other resources with information on 1J04

Community annotation for 1J04 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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