1JBU	Hydrolase Hydrolase Inhibitor	date	Jun 06, 2001
title	Coagulation Factor Vii Zymogen (Egf2protease) In Complex Wi Inhibitory Exosite Peptide A-183
authors	C.Eigenbrot, D.Kirchhofer, M.S.Dennis, L.Santell, R.A.Lazarus, J. M.H.Ultsch
compound		source
Molecule: Coagulation Factor Vii Chain: H Fragment: Heavy Chain Synonym: Serum Prothrombin Conversion Accelerator Ec: 3.4.21.21 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_strain: High-Five Expression_system_vector_type: Plasmid Expression_system_plasmid: Pacgp67
Molecule: Coagulation Factor Vii Chain: L Fragment: Light Chain Synonym: Serum Prothrombin Conversion Accelerator Ec: 3.4.21.21 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_strain: High-Five Expression_system_vector_type: Plasmid Expression_system_plasmid: Pacgp67
Molecule: Peptide Exosite Inhibitor A-183 Chain: X Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Synthetic Construct Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: 27c7 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pa-100-Z
symmetry	Space Group: P 21 21 21	R_factor 0.204 R_Free 0.227
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.440 84.510 84.840 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	BEN, SO4	enzyme	Hydrolase E.C.3.4.21.21 BRENDA
related structures	by homologous chain: 1O5D, 1YGC, 1Z6J
Gene Ontology	Chain Function Process Component H L
Primary reference	The factor VII zymogen structure reveals reregistration of beta strands during activation., Eigenbrot C, Kirchhofer D, Dennis MS, Santell L, Lazarus RA, Stamos J, Ultsch MH, Structure (Camb) 2001 Jul 3;9(7):627-36. PMID:11470437

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk] Biological Unit Coordinates (1jbu.pdb1.gz) 55 Kb Biological Unit Coordinates (1jbu.pdb2.gz) 55 Kb LPC: Ligand-Protein Contacts for 1JBU CSU: Contacts of Structural Units for 1JBU Likely Quarternary Molecular Structure file(s) for 1JBU Retrieve 1JBU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JBU from S2C, [Save to disk]

View 1JBU in 3D

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Visual 3D analysis of 1JBU

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JBU, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jbuh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1jbul_, region L [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jbu_X] [1jbu_H] [1jbu] [1jbu_L] SWISS-PROT database: [P08709] Domain organization of [FA7_HUMAN] by SWISSPFAM Domains found in 1JBU: [EGF] [Tryp_SPc ] by SMART

Other resources with information on 1JBU

Community annotation for 1JBU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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