1JDG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BPA	enzyme
Primary reference	Solution structure of a trans-opened (10S)-dA adduct of (+)-(7S,8R,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyr ene in a fully complementary DNA duplex: evidence for a major syn conformation., Pradhan P, Tirumala S, Liu X, Sayer JM, Jerina DM, Yeh HJ, Biochemistry 2001 May 22;40(20):5870-81. PMID:11352722

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk] Biological Unit Coordinates (1jdg.pdb1.gz) 12 Kb LPC: Ligand-Protein Contacts for 1JDG CSU: Contacts of Structural Units for 1JDG Original NMR restraints for 1JDG from PDB Retrieve 1JDG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JDG from S2C, [Save to disk]

View 1JDG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jdg] [1jdg_A] [1jdg_B] SWISS-PROT database:

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