1JGN	Rna Binding Protein	date	Jun 26, 2001
title	Solution Structure Of The C-Terminal Pabc Domain Of Human Po Binding Protein In Complex With The Peptide From Paip2
authors	G.Kozlov, N.Siddiqui, S.Coillet-Matillon, I.Ekiel, K.Gehring
compound		source
Molecule: Polyadenylate-Binding Protein 1 Chain: A Fragment: C-Terminal Domain Synonym: Pabp1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pabpc1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Gold Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
Molecule: Polyadenylate-Binding Protein-Interacting Protein Chain: B Fragment: C-Terminal 22 Residues Synonym: Paip2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Gold Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
method	Solution NMR
related structures	by homologous chain: 1G9L, 1JH4
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis of ligand recognition by PABC, a highly specific peptide-binding domain found in poly(A)-binding protein and a HECT ubiquitin ligase., Kozlov G, De Crescenzo G, Lim NS, Siddiqui N, Fantus D, Kahvejian A, Trempe JF, Elias D, Ekiel I, Sonenberg N, O'Connor-McCourt M, Gehring K, EMBO J 2004 Jan 28;23(2):272-81. Epub 2003 Dec 18. PMID:14685257

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (907 Kb) [Save to disk] Biological Unit Coordinates (1jgn.pdb1.gz) 30 Kb CSU: Contacts of Structural Units for 1JGN Original NMR restraints for 1JGN from PDB Experimental data, such as chemical shifts, at BioMagResBank (BMRB) NMR Restraints Grid from BioMagResBank (BMRB) Retrieve 1JGN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JGN from S2C, [Save to disk]

View 1JGN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JGN

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JGN, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jgna_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jgn_A] [1jgn_B] [1jgn] SWISS-PROT database: [P11940] [Q9BPZ3] Domain organization of [PABP1_HUMAN] [PAIP2_HUMAN] by SWISSPFAM Domain found in 1JGN: [PolyA ] by SMART

Other resources with information on 1JGN

Community annotation for 1JGN at PDBWiki (http://pdbwiki.org) NMR Ensemble (OLDERADO: core, domain and representative structure database) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---