1JMC	Replication Dna	date	Nov 11, 1996
title	Single Stranded Dna-Binding Domain Of Human Replication Protein A Bound To Single Stranded Dna, Rpa70 Subunit, Residues 183-420
authors	A.Bochkarev, R.Pfuetzner, A.Edwards, L.Frappier
compound		source
Molecule: Dna (5'-D(Cpcpcpcpcpcpcpc)-3') Chain: B Engineered: Yes		Synthetic: Yes
Molecule: Protein (Replication Protein A (Rpa)) Chain: A Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Plyss Expression_system_plasmid: Pet15b
symmetry	Space Group: P 21 21 21	R_factor 0.100 R_Free 0.330
crystal cell	length a length b length c angle alpha angle beta angle gamma 34.250 77.990 95.360 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
related structures	by homologous chain: 1FGU
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of the single-stranded-DNA-binding domain of replication protein A bound to DNA., Bochkarev A, Pfuetzner RA, Edwards AM, Frappier L, Nature 1997 Jan 9;385(6612):176-81. PMID:8990123

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (1jmc.pdb1.gz) 54 Kb CSU: Contacts of Structural Units for 1JMC Likely Quarternary Molecular Structure file(s) for 1JMC Structure Factors (88 Kb) Retrieve 1JMC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JMC from S2C, [Save to disk] Re-refined 1jmc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JMC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JMC

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JMC, from MSDmotif at EBI Genome occurence of 1JMC's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jmca1, region A:183-298 [Jmol] [rasmolscript] [script source]     - Domain d1jmca2, region A:299-420 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jmc_B] [1jmc] [1jmc_A] SWISS-PROT database: [P27694] Domain organization of [RFA1_HUMAN] by SWISSPFAM

Other resources with information on 1JMC

Community annotation for 1JMC at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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