1JMY	Hydrolase	date	Jul 20, 2001
title	Truncated Recombinant Human Bile Salt Stimulated Lipase
authors	S.A.Moore, R.L.Kingston, K.M.Loomes, O.Hernell, L.Blackberg, H.M. E.N.Baker
compound		source
Molecule: Bile-Salt-Activated Lipase Chain: A Fragment: 1-518 Ec: 3.1.1.3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029 Expression_system_cell_line: Kidney Cells Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnut
symmetry	Space Group: P 21 21 21	R_factor 0.236 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.640 90.080 103.260 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	SO4	enzyme	Hydrolase E.C.3.1.1.3 BRENDA
related structures	by homologous chain: 1AKN, 1F6W
Gene Ontology	Chain Function Process Component A
Primary reference	The structure of truncated recombinant human bile salt-stimulated lipase reveals bile salt-independent conformational flexibility at the active-site loop and provides insights into heparin binding., Moore SA, Kingston RL, Loomes KM, Hernell O, Blackberg L, Baker HM, Baker EN, J Mol Biol 2001 Sep 21;312(3):511-23. PMID:11563913

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (1jmy.pdb1.gz) 81 Kb LPC: Ligand-Protein Contacts for 1JMY CSU: Contacts of Structural Units for 1JMY Likely Quarternary Molecular Structure file(s) for 1JMY Structure Factors (163 Kb) Retrieve 1JMY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JMY from S2C, [Save to disk] Re-refined 1jmy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JMY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JMY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JMY, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jmya_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jmy_A] [1jmy] SWISS-PROT database: [P19835] Domain organization of [CEL_HUMAN] by SWISSPFAM

Other resources with information on 1JMY

Community annotation for 1JMY at PDBWiki (http://pdbwiki.org) LED, table of lipase structures from Lipase Engineering Database. MMDB (Entrez's Structure Database)

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