1JNL	Immune System	date	Jul 24, 2001
title	Crystal Structure Of Fab-Estradiol Complexes
authors	C.Monnet, F.Bettsworth, E.A.Stura, M.H.Le Du, R.Menez, L.Derrien Justin, B.Gilquin, G.Sibai, N.Battail-Poirot, M.Jolivet, A.Menez M.Arnaud, F.Ducancel, J.B.Charbonnier
compound		source
Molecule: Monoclonal Anti-Estradiol 17e12e5 Immunoglobulin Chain; Chain: L Synonym: Fab' 17e12, Light Chain		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090
Molecule: Monoclonal Anti-Estradiol 17e12e5 Immunoglobulin Chain; Chain: H Synonym: Fab' 17e12, Heavy Chain		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090
symmetry	Space Group: P 21 21 2	R_factor 0.195 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.950 143.240 53.370 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
related structures	by homologous chain: 1FBI, 1NMA, 1YUH, 3CK0
Primary reference	Highly specific anti-estradiol antibodies: structural characterisation and binding diversity., Monnet C, Bettsworth F, Stura EA, Le Du MH, Menez R, Derrien L, Zinn-Justin S, Gilquin B, Sibai G, Battail-Poirot N, Jolivet M, Menez A, Arnaud M, Ducancel F, Charbonnier JB, J Mol Biol 2002 Jan 25;315(4):699-712. PMID:11812141

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (1jnl.pdb1.gz) 59 Kb CSU: Contacts of Structural Units for 1JNL Likely Quarternary Molecular Structure file(s) for 1JNL Structure Factors (82 Kb) Retrieve 1JNL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JNL from S2C, [Save to disk] Re-refined 1jnl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JNL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JNL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JNL, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jnlh1, region H:1-114 [Jmol] [rasmolscript] [script source]     - Domain d1jnlh2, region H:115-231 [Jmol] [rasmolscript] [script source]     - Domain d1jnll1, region L:1-107 [Jmol] [rasmolscript] [script source]     - Domain d1jnll2, region L:108-211 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jnl_H] [1jnl] [1jnl_L] SWISS-PROT database: [P01837] [Q7TS98] [Q99LC4] Domain organization of [IGKC_MOUSE] [Q7TS98_MOUSE] [Q99LC4_MOUSE] by SWISSPFAM Domains found in 1JNL: [IG_like] [IGv ] by SMART

Other resources with information on 1JNL

Community annotation for 1JNL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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