1FBI CRYSTAL STRUCTURE OF A CROSS-REACTION COMPLEX BETWEEN FAB F9.13.7 AND GUINEA-FOWL LYSOZYME date
authors Lescar, J., Alzari, P.M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
related structures by homologous chain: 1F11, 1JA7, 1JNL, 1NMA, 1YUH, 3HFM
Gene
Ontology
ChainFunctionProcessComponent
P, L


X, Y


Primary referenceCrystal structure of a cross-reaction complex between Fab F9.13.7 and guinea fowl lysozyme., Lescar J, Pellegrini M, Souchon H, Tello D, Poljak RJ, Peterson N, Greene M, Alzari PM, J Biol Chem 1995 Jul 28;270(30):18067-76. PMID:7629116
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (1fbi.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (1fbi.pdb2.gz) 88 Kb
  • CSU: Contacts of Structural Units for 1FBI
  • Likely Quarternary Molecular Structure file(s) for 1FBI
  • Retrieve 1FBI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FBI from S2C, [Save to disk]
    • View 1FBI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FBI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FBI, from MSDmotif at EBI
  • Genome occurence of 1FBI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fbih1, region H:1-121 [Jmol] [rasmolscript] [script source]
        - Domain d1fbih2, region H:122-221 [Jmol] [rasmolscript] [script source]
        - Domain d1fbil1, region L:1-107 [Jmol] [rasmolscript] [script source]
        - Domain d1fbil2, region L:108-214 [Jmol] [rasmolscript] [script source]
        - Domain d1fbip1, region P:1-107 [Jmol] [rasmolscript] [script source]
        - Domain d1fbip2, region P:108-214 [Jmol] [rasmolscript] [script source]
        - Domain d1fbiq1, region Q:1-121 [Jmol] [rasmolscript] [script source]
        - Domain d1fbiq2, region Q:122-221 [Jmol] [rasmolscript] [script source]
        - Domain d1fbix_, region X [Jmol] [rasmolscript] [script source]
        - Domain d1fbiy_, region Y [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fbi] [1fbi_X] [1fbi_L] [1fbi_P] [1fbi_H] [1fbi_Y] [1fbi_Q]
  • SWISS-PROT database: [P01868] [P01837] [P00704]
  • Domain organization of [IGHG1_MOUSE] [IGKC_MOUSE] [LYSC_NUMME] by SWISSPFAM
  • Domains found in 1FBI: [IG_like] [IGv] [LYZ1 ] by SMART
    • Other resources with information on 1FBI
  • Community annotation for 1FBI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1FBI from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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