1JUO Metal Transport date Aug 24, 2001
title Crystal Structure Of Calcium-Free Human Sorcin: A Member Of The Penta-Ef-Hand Protein Family
authors X.Xie
compound source
Molecule: Sorcin
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 43 21 2
R_factor 0.218 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.250 118.250 85.490 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
related structures by homologous chain: 1F4Q, 1GJY
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of calcium-free human sorcin: a member of the penta-EF-hand protein family., Xie X, Dwyer MD, Swenson L, Parker MH, Botfield MC, Protein Sci 2001 Dec;10(12):2419-25. PMID:11714909
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (1juo.pdb1.gz) 60 Kb
  • CSU: Contacts of Structural Units for 1JUO
  • Likely Quarternary Molecular Structure file(s) for 1JUO
  • Retrieve 1JUO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JUO from S2C, [Save to disk]
  • View 1JUO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JUO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1JUO, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1juoa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1juob_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1juo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1juo] [1juo_A] [1juo_B]
  • SWISS-PROT database: [P30626]
  • Domain organization of [SORCN_HUMAN] by SWISSPFAM
  • Domain found in 1JUO: [EFh ] by SMART
  • Other resources with information on 1JUO
  • Community annotation for 1JUO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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