1K05 Transferase date Sep 18, 2001
title Crystal Structure Of The Focal Adhesion Targeting Domain Of Focal Adhesion Kinase
authors S.T.Arold, M.K.Hoellerer, M.E.M.Noble
compound source
Molecule: Focal Adhesion Kinase 1
Chain: A, B, C
Synonym: Fadk 1
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fak
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p2
symmetry Space Group: C 2 2 21
R_factor 0.245 R_Free 0.285
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.484 222.101 97.885 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1OW8, 1QVX
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceThe structural basis of localization and signaling by the focal adhesion targeting domain., Arold ST, Hoellerer MK, Noble ME, Structure (Camb) 2002 Mar;10(3):319-27. PMID:12005431
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (1k05.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (1k05.pdb2.gz) 23 Kb
  • Biological Unit Coordinates (1k05.pdb3.gz) 23 Kb
  • Biological Unit Coordinates (1k05.pdb4.gz) 87 Kb
  • Biological Unit Coordinates (1k05.pdb5.gz) 45 Kb
  • Biological Unit Coordinates (1k05.pdb6.gz) 89 Kb
  • Biological Unit Coordinates (1k05.pdb7.gz) 45 Kb
  • CSU: Contacts of Structural Units for 1K05
  • Likely Quarternary Molecular Structure file(s) for 1K05
  • Structure Factors (154 Kb)
  • Retrieve 1K05 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1K05 from S2C, [Save to disk]
  • Re-refined 1k05 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1K05 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1K05
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1K05, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1k05a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1k05b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1k05c_, region C [Jmol] [rasmolscript] [script source]
  • Fold representative 1k05 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1k05_B] [1k05] [1k05_C] [1k05_A]
  • SWISS-PROT database: [Q05397]
  • Domain organization of [FAK1_HUMAN] by SWISSPFAM
  • Other resources with information on 1K05
  • Community annotation for 1K05 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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