1OW8 Transferase date Mar 28, 2003
title Paxillin Ld2 Motif Bound To The Focal Adhesion Targeting (Fat) Domain Of The Focal Adhesion Kinase
authors M.K.Hoellerer, M.E.M.Noble, G.Labesse, J.M.Werner, S.T.Arold
compound source
Molecule: Focal Adhesion Kinase 1
Chain: A, B, C
Fragment: Focal Adhesion Targeting
Synonym: Fadk 1, Pp125fak, Protein- Tyrosine Kinase 2
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptk2 Or Fak1 Or Fak
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p2

Molecule: Paxillin
Chain: D, F
Fragment: Paxillin Ld2 Motif
Engineered: Yes

Synthetic: Yes
Other_details: Sequence Derived From Human Paxillin
symmetry Space Group: C 2 2 21
R_factor 0.235 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.976 220.780 97.373 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.85 Å
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1K05, 1OW7
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceMolecular recognition of paxillin LD motifs by the focal adhesion targeting domain., Hoellerer MK, Noble ME, Labesse G, Campbell ID, Werner JM, Arold ST, Structure (Camb) 2003 Oct;11(10):1207-17. PMID:14527389
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (1ow8.pdb1.gz) 71 Kb
  • CSU: Contacts of Structural Units for 1OW8
  • Likely Quarternary Molecular Structure file(s) for 1OW8
  • Structure Factors (169 Kb)
  • Retrieve 1OW8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OW8 from S2C, [Save to disk]
  • Re-refined 1ow8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OW8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OW8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OW8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ow8a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ow8b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ow8c_, region C [Jmol] [rasmolscript] [script source]
  • Fold representative 1ow8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ow8_F] [1ow8_C] [1ow8_A] [1ow8_D] [1ow8] [1ow8_B]
  • SWISS-PROT database: [Q05397]
  • Domain organization of [FAK1_HUMAN] by SWISSPFAM
  • Other resources with information on 1OW8
  • Community annotation for 1OW8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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