1K7L	Transcription	date	Oct 19, 2001
title	The 2.5 Angstrom Resolution Crystal Structure Of The Human P Ligand Binding Domain Bound With Gw409544 And A Co-Activato
authors	H.E.Xu, M.H.Lambert, V.G.Montana, L.B.Moore, J.L.Collins, J.A.Opl S.A.Kliewer, R.T.Gampe Jr., D.D.Mckee, J.T.Moore, T.M.Willson
compound		source
Molecule: Peroxisome Proliferator Activated Receptor Alpha Chain: A, C, E, G Fragment: Ligand Binding Domain - Residues 192 - 468 Synonym: Pparalpha Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) E.Coli Expression_system_vector_type: Prseta Expression_system_plasmid: T7 Promoter Control Plasmid
Molecule: Steroid Receptor Coactivator Chain: B, D, F, H Fragment: Src-1 Peptide Engineered: Yes		Synthetic: Yes Other_details: Chemically Synthesized 21mer Portion Of The Src-1 Coactivator Peptide.
symmetry	Space Group: P 21 21 21	R_factor 0.247 R_Free 0.284
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.561 121.597 121.994 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	544, YT3 BindingDB	enzyme
related structures	by homologous chain: 1GWX, 1Y0S
Gene Ontology	Chain Function Process Component A, C, G, E
Primary reference	Structural determinants of ligand binding selectivity between the peroxisome proliferator-activated receptors., Xu HE, Lambert MH, Montana VG, Plunket KD, Moore LB, Collins JL, Oplinger JA, Kliewer SA, Gampe RT Jr, McKee DD, Moore JT, Willson TM, Proc Natl Acad Sci U S A 2001 Nov 20;98(24):13919-24. PMID:11698662

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk] Biological Unit Coordinates (1k7l.pdb1.gz) 48 Kb Biological Unit Coordinates (1k7l.pdb2.gz) 49 Kb Biological Unit Coordinates (1k7l.pdb3.gz) 48 Kb Biological Unit Coordinates (1k7l.pdb4.gz) 48 Kb LPC: Ligand-Protein Contacts for 1K7L CSU: Contacts of Structural Units for 1K7L Likely Quarternary Molecular Structure file(s) for 1K7L Retrieve 1K7L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1K7L from S2C, [Save to disk]

View 1K7L in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1K7L

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1K7L, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1k7la_, region A [Jmol] [rasmolscript] [script source]     - Domain d1k7lc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1k7le_, region E [Jmol] [rasmolscript] [script source]     - Domain d1k7lg_, region G [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1k7l] [1k7l_H] [1k7l_G] [1k7l_C] [1k7l_A] [1k7l_E] [1k7l_D] [1k7l_B] [1k7l_F] SWISS-PROT database: [Q15788] [Q07869] Domain organization of [NCOA1_HUMAN] [PPARA_HUMAN] by SWISSPFAM Domain found in 1K7L: [HOLI ] by SMART

Other resources with information on 1K7L

Community annotation for 1K7L at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---