1GWX	Transcription	date	Mar 17, 1999
title	Molecular Recognition Of Fatty Acids By Peroxisome Proliferator-Activated Receptors
authors	H.E.Xu, M.H.Lambert, V.G.Montana, D.J.Park, S.Blanchard, P.Brown, D.Sternbach, J.Lehmann, G.W.Bruce, T.M.Willson, S.A.Kliewer, M.V.Milburn
compound		source
Molecule: Protein (Ppar-Delta) Chain: A, B Fragment: Ligand Binding Domain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ppard Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De30) Expression_system_plasmid: Pseta With T7 Promoter
symmetry	Space Group: P 1 21 1	R_factor 0.246 R_Free 0.303
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.250 94.900 96.200 90.00 98.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	433 BindingDB	enzyme
related structures	by homologous chain: 1K7L, 1KNU
Primary reference	Molecular recognition of fatty acids by peroxisome proliferator-activated receptors., Xu HE, Lambert MH, Montana VG, Parks DJ, Blanchard SG, Brown PJ, Sternbach DD, Lehmann JM, Wisely GB, Willson TM, Kliewer SA, Milburn MV, Mol Cell 1999 Mar;3(3):397-403. PMID:10198642

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk] Biological Unit Coordinates (1gwx.pdb1.gz) 92 Kb LPC: Ligand-Protein Contacts for 1GWX CSU: Contacts of Structural Units for 1GWX Likely Quarternary Molecular Structure file(s) for 1GWX Structure Factors (177 Kb) Retrieve 1GWX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GWX from S2C, [Save to disk] Re-refined 1gwx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1GWX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GWX

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1GWX, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gwxa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1gwxb_, region B [Jmol] [rasmolscript] [script source] Fold representative 1gwx from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gwx_A] [1gwx_B] [1gwx] SWISS-PROT database: [Q03181] Domain organization of [PPARD_HUMAN] by SWISSPFAM Domain found in 1GWX: [HOLI ] by SMART

Other resources with information on 1GWX

Community annotation for 1GWX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014 Bioinformatics Unit Weizmann Institute of Science

---