1KJT	Transport Protein	date	Dec 05, 2001
title	Crystal Structure Of The Gaba(A) Receptor Associated Protein
authors	V.N.Bavro, M.Sola, A.Bracher, M.Kneussel, H.Betz, W.Weissenhorn
compound		source
Molecule: Gabarap Chain: A Synonym: Gaba-A Receptor-Associated Protein Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Codon + Expression_system_vector_type: Plasmid Expression_system_plasmid: Modified Pmal-C2g
symmetry	Space Group: P 21 21 21	R_factor 0.235 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 29.720 56.040 64.990 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	NA, NI	enzyme
related structures	by homologous chain: 1GNU, 1KLV
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the GABA(A)-receptor-associated protein, GABARAP., Bavro VN, Sola M, Bracher A, Kneussel M, Betz H, Weissenhorn W, EMBO Rep 2002 Feb;3(2):183-9. PMID:11818336

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (1kjt.pdb1.gz) 21 Kb LPC: Ligand-Protein Contacts for 1KJT CSU: Contacts of Structural Units for 1KJT Likely Quarternary Molecular Structure file(s) for 1KJT Retrieve 1KJT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1KJT from S2C, [Save to disk]

View 1KJT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1KJT

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1KJT, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1kjta_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1kjt_A] [1kjt] SWISS-PROT database: [P60517] Domain organization of [GBRAP_RAT] by SWISSPFAM

Other resources with information on 1KJT

Community annotation for 1KJT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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