1KNT THE 1.6 ANGSTROMS STRUCTURE OF THE KUNITZ-TYPE DOMAIN FROM THE ALPHA3 CHAIN OF THE HUMAN TYPE VI COLLAGEN date
authors Arnoux, B., Merigeau, K., Saludjian, P., Norris, F., Norris, K., Bjorn, S., Olsen, O., Petersen, L., Ducruix, A.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand SO4 enzyme
related structures by homologous chain: 1KUN, 2KNT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe 1.6 A structure of Kunitz-type domain from the alpha 3 chain of human type VI collagen., Arnoux B, Merigeau K, Saludjian P, Norris F, Norris K, Bjorn S, Olsen O, Petersen L, Ducruix A, J Mol Biol 1995 Mar 10;246(5):609-17. PMID:7533217
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (13 Kb) [Save to disk]
  • Biological Unit Coordinates (1knt.pdb1.gz) 10 Kb
  • LPC: Ligand-Protein Contacts for 1KNT
  • CSU: Contacts of Structural Units for 1KNT
  • Likely Quarternary Molecular Structure file(s) for 1KNT
  • Retrieve 1KNT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KNT from S2C, [Save to disk]
  • View 1KNT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KNT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KNT, from MSDmotif at EBI
  • Genome occurence of 1KNT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1knt__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1knt] [1knt_A]
  • SWISS-PROT database: [P12111]
  • Domain organization of [CO6A3_HUMAN] by SWISSPFAM
  • Domain found in 1KNT: [KU ] by SMART
  • Other resources with information on 1KNT
  • Community annotation for 1KNT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science