1KUN Extracellular Matrix date Mar 04, 1997
title Solution Structure Of The Human Alpha3-Chain Type Vi Collagen C-Terminal Kunitz Domain, Nmr, 20 Structures
authors M.D.Sorensen, S.Bjorn, K.Norris, O.Olsen, L.Petersen, T.L.James, J.J.Led
compound source
Molecule: Alpha3-Chain Type Vi Collagen
Chain: A
Fragment: C-Terminal Kunitz Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Potential
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
Expression_system_strain: Mt-663
methodSolution NMR
related structures by homologous chain: 1KNT
Primary referenceSolution structure and backbone dynamics of the human alpha3-chain type VI collagen C-terminal Kunitz domain,., Sorensen MD, Bjorn S, Norris K, Olsen O, Petersen L, James TL, Led JJ, Biochemistry 1997 Aug 26;36(34):10439-50. PMID:9265624
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1KUN
  • Original NMR restraints for 1KUN from PDB
  • Retrieve 1KUN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KUN from S2C, [Save to disk]
  • View 1KUN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KUN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1KUN, from MSDmotif at EBI
  • Genome occurence of 1KUN's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kun__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1kun from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kun_A] [1kun]
  • SWISS-PROT database: [P12111]
  • Domain organization of [CO6A3_HUMAN] by SWISSPFAM
  • Domain found in 1KUN: [KU ] by SMART
  • Other resources with information on 1KUN
  • Community annotation for 1KUN at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1KUN from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science