1LAR	Hydrolase	date	Apr 20, 1999
title	Crystal Structure Of The Tandem Phosphatase Domains Of Rptp
authors	H.J.Nam, F.Poy, N.Krueger, H.Saito, C.A.Frederick
compound		source
Molecule: Protein (Lar) Chain: A, B Fragment: Phosphatase Ec: 3.1.3.48 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 Expression_system_variant: De3
symmetry	Space Group: P 1 21 1	R_factor 0.222 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 66.920 62.730 161.590 90.00 98.94 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand		enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of the tandem phosphatase domains of RPTP LAR., Nam HJ, Poy F, Krueger NX, Saito H, Frederick CA, Cell 1999 May 14;97(4):449-57. PMID:10338209

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (188 Kb) [Save to disk] Biological Unit Coordinates (1lar.pdb1.gz) 97 Kb Biological Unit Coordinates (1lar.pdb2.gz) 90 Kb CSU: Contacts of Structural Units for 1LAR Likely Quarternary Molecular Structure file(s) for 1LAR Retrieve 1LAR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LAR from S2C, [Save to disk]

View 1LAR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1LAR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1LAR, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1lara1, region A:1307-1623 [Jmol] [rasmolscript] [script source]     - Domain d1lara2, region A:1628-1876 [Jmol] [rasmolscript] [script source]     - Domain d1larb1, region B:1340-1623 [Jmol] [rasmolscript] [script source]     - Domain d1larb2, region B:1628-1876 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lar_B] [1lar] [1lar_A] SWISS-PROT database: [P10586] Domain organization of [PTPRF_HUMAN] by SWISSPFAM Domain found in 1LAR: [PTPc ] by SMART

Other resources with information on 1LAR

Community annotation for 1LAR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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