1LM7	Structural Protein	date	Apr 30, 2002
title	Structures Of Two Intermediate Filament-Binding Fragments Of Desmoplakin Reveal A Unique Repeat Motif Structure
authors	H.J.Choi, S.Park-Snyder, L.T.Pascoe, K.J.Green, W.I.Weis
compound		source
Molecule: Subdomain Of Desmoplakin Carboxy-Terminal Domain Chain: A, B Fragment: Residues 2209-2456 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5a Expression_system_vector_type: Plasmid Expression_system_plasmid: Pproex Htc
symmetry	Space Group: P 1 21 1	R_factor 0.249 R_Free 0.296
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.293 99.773 51.687 90.00 97.58 90.00
method	X-Ray Diffraction	resolution	3.00 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structures of two intermediate filament-binding fragments of desmoplakin reveal a unique repeat motif structure., Choi HJ, Park-Snyder S, Pascoe LT, Green KJ, Weis WI, Nat Struct Biol 2002 Aug;9(8):612-20. PMID:12101406

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk] Biological Unit Coordinates (1lm7.pdb1.gz) 74 Kb CSU: Contacts of Structural Units for 1LM7 Likely Quarternary Molecular Structure file(s) for 1LM7 Structure Factors (87 Kb) Retrieve 1LM7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LM7 from S2C, [Save to disk] Re-refined 1lm7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1LM7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1LM7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1LM7, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1lm7a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1lm7b_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lm7] [1lm7_A] [1lm7_B] SWISS-PROT database: [P15924] Domain organization of [DESP_HUMAN] by SWISSPFAM Domain found in 1LM7: [PLEC ] by SMART

Other resources with information on 1LM7

Community annotation for 1LM7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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