1LP9	Xenoreactive complex AHIII 12.2 TCR bound to p1049/HLA-A2.1	date
authors	Buslepp, J., Wang, H., Biddison, W.E., Appella, E., Collins, E.J.
compound		source
symmetry		R_factor R_Free 0.25293
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.00
related structures	by homologous chain: 1J8H, 1MWA, 1WBZ, 2BNR, 2BSS
Gene Ontology	Chain Function Process Component F, M I, B cellular response to iron io...
Primary reference	A correlation between TCR Valpha docking on MHC and CD8 dependence: implications for T cell selection., Buslepp J, Wang H, Biddison WE, Appella E, Collins EJ, Immunity 2003 Oct;19(4):595-606. PMID:14563323

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (275 Kb) [Save to disk] Biological Unit Coordinates (1lp9.pdb1.gz) 134 Kb Biological Unit Coordinates (1lp9.pdb2.gz) 134 Kb CSU: Contacts of Structural Units for 1LP9 Likely Quarternary Molecular Structure file(s) for 1LP9 Structure Factors (1076 Kb) Retrieve 1LP9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LP9 from S2C, [Save to disk] Re-refined 1lp9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1LP9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1LP9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1LP9, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1lp9a2, region A:1-181 [Jmol] [rasmolscript] [script source]     - Domain d1lp9a1, region A:182-275 [Jmol] [rasmolscript] [script source]     - Domain d1lp9b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1lp9e1, region E:0-117 [Jmol] [rasmolscript] [script source]     - Domain d1lp9e2, region E:118-198 [Jmol] [rasmolscript] [script source]     - Domain d1lp9f1, region F:1-117 [Jmol] [rasmolscript] [script source]     - Domain d1lp9f2, region F:118-245 [Jmol] [rasmolscript] [script source]     - Domain d1lp9h2, region H:1-181 [Jmol] [rasmolscript] [script source]     - Domain d1lp9h1, region H:182-275 [Jmol] [rasmolscript] [script source]     - Domain d1lp9i_, region I [Jmol] [rasmolscript] [script source]     - Domain d1lp9l1, region L:0-117 [Jmol] [rasmolscript] [script source]     - Domain d1lp9l2, region L:118-198 [Jmol] [rasmolscript] [script source]     - Domain d1lp9m1, region M:1-117 [Jmol] [rasmolscript] [script source]     - Domain d1lp9m2, region M:118-245 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lp9_H] [1lp9_F] [1lp9] [1lp9_I] [1lp9_C] [1lp9_B] [1lp9_L] [1lp9_J] [1lp9_E] [1lp9_A] [1lp9_M] SWISS-PROT database: [P01892] [P61769] Domain organization of [1A02_HUMAN] [B2MG_HUMAN] by SWISSPFAM Domains found in 1LP9: [IG] [IG_like] [IGc1] [IGv ] by SMART

Other resources with information on 1LP9

Community annotation for 1LP9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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