1LSI Neurotoxin date Nov 26, 1995
title Lsiii (Nmr, 23 Structures)
authors P.J.Connolly, A.S.Stern, J.C.Hoch
compound source
Molecule: Lsiii
Chain: A
Synonym: Long Neurotoxin 1 (Component Lsiii)
Organism_scientific: Laticauda Semifasciata
Organism_common: Broad-Banded Blue Sea Krait
Organism_taxid: 8631
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Primary referenceSolution structure of LSIII, a long neurotoxin from the venom of Laticauda semifasciata., Connolly PJ, Stern AS, Hoch JC, Biochemistry 1996 Jan 16;35(2):418-26. PMID:8555211
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (370 Kb) [Save to disk]
  • Biological Unit Coordinates (1lsi.pdb1.gz) 16 Kb
  • CSU: Contacts of Structural Units for 1LSI
  • Original NMR restraints for 1LSI from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1LSI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LSI from S2C, [Save to disk]
  • View 1LSI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LSI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LSI, from MSDmotif at EBI
  • Genome occurence of 1LSI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lsi__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lsi] [1lsi_A]
  • SWISS-PROT database: [P01379]
  • Domain organization of [NXL1_LATSE] by SWISSPFAM
  • Other resources with information on 1LSI
  • Community annotation for 1LSI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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