1MJS Transcription date Aug 28, 2002
title Mh2 Domain Of Transcriptional Factor Smad3
authors B.Y.Qin, S.S.Lam, J.J.Correia, K.Lin
compound source
Molecule: Smad 3
Chain: A
Fragment: Mh2 Domain, Residues 229-425
Synonym: Mad3, Hmad-3, Mmad3, Jv15-2, Hsmad3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Smad3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32
R_factor 0.196 R_Free 0.199
length a length b length c angle alpha angle beta angle gamma
54.325 54.325 59.428 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.91 Å
related structures by homologous chain: 1DEV, 1KHX

Primary referenceSmad3 allostery links TGF-beta receptor kinase activation to transcriptional control., Qin BY, Lam SS, Correia JJ, Lin K, Genes Dev 2002 Aug 1;16(15):1950-63. PMID:12154125
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1mjs.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 1MJS
  • Likely Quarternary Molecular Structure file(s) for 1MJS
  • Structure Factors (221 Kb)
  • Retrieve 1MJS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MJS from S2C, [Save to disk]
  • Re-refined 1mjs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1MJS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MJS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1MJS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mjsa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1mjs from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mjs] [1mjs_A]
  • SWISS-PROT database: [P84022]
  • Domain organization of [SMAD3_HUMAN] by SWISSPFAM
  • Domain found in 1MJS: [DWB ] by SMART
  • Other resources with information on 1MJS
  • Community annotation for 1MJS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science