1MZC Transferase date Oct 07, 2002
title Co-Crystal Structure Of Human Farnesyltransferase With Farnesyldiphosphate And Inhibitor Compound 33a
authors S.J.Desolms, T.M.Ciccarone, S.C.Mactough, A.W.Shaw, C.A.Buser, M.Ellis-Hutchings, C.Fernandes, K.A.Hamilton, H.E.Huber, N.E.Kohl, R.B.Lobell, R.G.Robinson, N.N.Tsou, E.S.Walsh, S.L.Graham, L.S.Beese, J.S.Taylor
compound source
Molecule: Protein Farnesyltransferase Alpha Subunit
Chain: A
Synonym: Caax Farnesyltransferase Alpha Subunit, Ras Proteins Prenyltransferase Alpha, Ftase-Alpha;
Ec: 2.5.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Protein Farnesyltransferase Beta Subunit
Chain: B
Synonym: Caax Farnesyltransferase Beta Subunit, Ras Proteins Prenyltransferase Beta, Ftase-Beta;
Ec: 2.5.1.-
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61
R_factor 0.177 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
178.385 178.385 64.579 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand BNE, FPP, SUC, ZN enzyme Transferase E.C.2.5.1 BRENDA
related structures by homologous chain: 1JCR, 1LD7
Gene
Ontology
ChainFunctionProcessComponent
A
  • acetylcholine receptor regul...
  • skeletal muscle acetylcholin...

  • B


    Primary referenceDual protein farnesyltransferase-geranylgeranyltransferase-I inhibitors as potential cancer chemotherapeutic agents., deSolms SJ, Ciccarone TM, MacTough SC, Shaw AW, Buser CA, Ellis-Hutchings M, Fernandes C, Hamilton KA, Huber HE, Kohl NE, Lobell RB, Robinson RG, Tsou NN, Walsh ES, Graham SL, Beese LS, Taylor JS, J Med Chem 2003 Jul 3;46(14):2973-84. PMID:12825937
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]
  • Biological Unit Coordinates (1mzc.pdb1.gz) 134 Kb
  • LPC: Ligand-Protein Contacts for 1MZC
  • CSU: Contacts of Structural Units for 1MZC
  • Likely Quarternary Molecular Structure file(s) for 1MZC
  • Structure Factors (823 Kb)
  • Retrieve 1MZC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MZC from S2C, [Save to disk]
  • Re-refined 1mzc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1MZC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MZC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1MZC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mzca_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mzcb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1mzc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mzc_A] [1mzc] [1mzc_B]
  • SWISS-PROT database: [P49354] [P49356]
  • Domain organization of [FNTA_HUMAN] [FNTB_HUMAN] by SWISSPFAM
  • Other resources with information on 1MZC
  • Community annotation for 1MZC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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