1MZC Transferase date Oct 07, 2002
title Co-Crystal Structure Of Human Farnesyltransferase With Farnesyldiphosphate And Inhibitor Compound 33a
authors S.J.Desolms, T.M.Ciccarone, S.C.Mactough, A.W.Shaw, C.A.Buser, M. Hutchings, C.Fernandes, K.A.Hamilton, H.E.Huber, N.E.Kohl, R.B.L R.G.Robinson, N.N.Tsou, E.S.Walsh, S.L.Graham, L.S.Beese, J.S.Ta
compound source
Molecule: Protein Farnesyltransferase Alpha Subunit
Chain: A
Synonym: Caax Farnesyltransferase Alpha Subunit, Ras Protei Prenyltransferase Alpha, Ftase-Alpha;
Ec: 2.5.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Protein Farnesyltransferase Beta Subunit
Chain: B
Synonym: Caax Farnesyltransferase Beta Subunit, Ras Protein Prenyltransferase Beta, Ftase-Beta;
Ec: 2.5.1.-
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61
R_factor 0.177 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
178.385 178.385 64.579 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand BNE, FPP, SUC, ZN enzyme Transferase E.C.2.5.1 BRENDA
related structures by homologous chain: 1JCR, 1LD7
Gene
Ontology
ChainFunctionProcessComponent
A
  • acetylcholine receptor regul...
  • skeletal muscle acetylcholin...

  • B


    Primary referenceDual protein farnesyltransferase-geranylgeranyltransferase-I inhibitors as potential cancer chemotherapeutic agents., deSolms SJ, Ciccarone TM, MacTough SC, Shaw AW, Buser CA, Ellis-Hutchings M, Fernandes C, Hamilton KA, Huber HE, Kohl NE, Lobell RB, Robinson RG, Tsou NN, Walsh ES, Graham SL, Beese LS, Taylor JS, J Med Chem 2003 Jul 3;46(14):2973-84. PMID:12825937
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk]
  • Biological Unit Coordinates (1mzc.pdb1.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 1MZC
  • CSU: Contacts of Structural Units for 1MZC
  • Likely Quarternary Molecular Structure file(s) for 1MZC
  • Structure Factors (823 Kb)
  • Retrieve 1MZC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MZC from S2C, [Save to disk]
  • Re-refined 1mzc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1MZC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MZC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1MZC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mzca_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mzcb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1mzc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mzc_A] [1mzc] [1mzc_B]
  • SWISS-PROT database: [P49354] [P49356]
  • Domain organization of [FNTA_HUMAN] [FNTB_HUMAN] by SWISSPFAM
  • Other resources with information on 1MZC
  • Community annotation for 1MZC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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