1N6V Immune System date Nov 12, 2002
title Average Structure Of The Interferon-Binding Ectodomain Of The Human Type I Interferon Receptor
authors J.H.Chill, S.R.Quadt, R.Levy, G.Schreiber, J.Anglister
compound source
Molecule: Interferon-Alphabeta Receptor Beta Chain
Chain: A
Synonym: Ifnar2-Ec, Ifn-Alpha-Rec, Type I Interferon Receptor, Ifn-R, Interferon Alphabeta Receptor- 2;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Tg1
Expression_system_vector_type: Plasmid
methodSolution NMR
related structures by homologous chain: 1N6U
Primary referenceThe human type I interferon receptor: NMR structure reveals the molecular basis of ligand binding., Chill JH, Quadt SR, Levy R, Schreiber G, Anglister J, Structure (Camb) 2003 Jul;11(7):791-802. PMID:12842042
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1N6V
  • Original NMR restraints for 1N6V from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1N6V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N6V from S2C, [Save to disk]
  • View 1N6V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N6V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1N6V, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n6va1, region A:1-109 [Jmol] [rasmolscript] [script source]
        - Domain d1n6va2, region A:110-212 [Jmol] [rasmolscript] [script source]
  • Fold representative 1n6v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n6v_A] [1n6v]
  • SWISS-PROT database: [P48551]
  • Domain organization of [INAR2_HUMAN] by SWISSPFAM
  • Other resources with information on 1N6V
  • Community annotation for 1N6V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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