1NE6	Hydrolase	date	Dec 10, 2002
title	Crystal Structure Of Sp-Camp Binding R1a Subunit Of Camp-Dep Protein Kinase
authors	J.Wu, J.M.Jones, N.H.Xuong, S.S.Taylor
compound		source
Molecule: Camp-Dependent Protein Kinase Type I-Alpha Regula Chain; Chain: A Fragment: 1-91 Deletion Mutant Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Gene: Prkar1a Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 65 2 2	R_factor 0.211 R_Free 0.241
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.400 87.400 178.700 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	SP1	enzyme
related structures	by homologous chain: 1NE4, 1U7E
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal Structures of RIalpha Subunit of Cyclic Adenosine 5'-Monophosphate (cAMP)-Dependent Protein Kinase Complexed with (R(p))-Adenosine 3',5'-Cyclic Monophosphothioate and (S(p))-Adenosine 3',5'-Cyclic Monophosphothioate, the Phosphothioate Analogues of cAMP(,)., Wu J, Jones JM, Xuong NH, Eyck LF, Taylor SS, Biochemistry 2004 Jun 1;43(21):6620-6629. PMID:15157095

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (1ne6.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 1NE6 CSU: Contacts of Structural Units for 1NE6 Likely Quarternary Molecular Structure file(s) for 1NE6 Structure Factors (276 Kb) Retrieve 1NE6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1NE6 from S2C, [Save to disk] Re-refined 1ne6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1NE6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1NE6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1NE6, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ne6a1, region A:109-244 [Jmol] [rasmolscript] [script source]     - Domain d1ne6a2, region A:245-376 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ne6] [1ne6_A] SWISS-PROT database: [P00514] Domain organization of [KAP0_BOVIN] by SWISSPFAM Domain found in 1NE6: [cNMP ] by SMART

Other resources with information on 1NE6

Community annotation for 1NE6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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