1NE4	Hydrolase	date	Dec 10, 2002
title	Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp-Dep Protein Kinase
authors	J.Wu, J.M.Jones, N.H.Xuong, S.S.Taylor
compound		source
Molecule: Camp-Dependent Protein Kinase Type I-Alpha Regula Chain; Chain: A Fragment: 1-91 Deletion Mutant Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Gene: Prkar1a Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 65 2 2	R_factor 0.209 R_Free 0.253
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.900 86.900 179.000 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	RP1	enzyme
related structures	by homologous chain: 1NE6, 1RL3
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal Structures of RIalpha Subunit of Cyclic Adenosine 5'-Monophosphate (cAMP)-Dependent Protein Kinase Complexed with (R(p))-Adenosine 3',5'-Cyclic Monophosphothioate and (S(p))-Adenosine 3',5'-Cyclic Monophosphothioate, the Phosphothioate Analogues of cAMP(,)., Wu J, Jones JM, Xuong NH, Eyck LF, Taylor SS, Biochemistry 2004 Jun 1;43(21):6620-6629. PMID:15157095

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (1ne4.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 1NE4 CSU: Contacts of Structural Units for 1NE4 Likely Quarternary Molecular Structure file(s) for 1NE4 Structure Factors (248 Kb) Retrieve 1NE4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1NE4 from S2C, [Save to disk] Re-refined 1ne4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1NE4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1NE4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1NE4, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ne4a1, region A:109-244 [Jmol] [rasmolscript] [script source]     - Domain d1ne4a2, region A:245-376 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ne4_A] [1ne4] SWISS-PROT database: [P00514] Domain organization of [KAP0_BOVIN] by SWISSPFAM Domain found in 1NE4: [cNMP ] by SMART

Other resources with information on 1NE4

Community annotation for 1NE4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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