1NU5 Isomerase date Jan 31, 2003
title Crystal Structure Of Pseudomonas Sp. P51 Chloromuconate Lact Enzyme
authors T.Kajander, L.Lehtio, A.Goldman
compound source
Molecule: Chloromuconate Cycloisomerase
Chain: A
Synonym: Cl-Mle, Muconate Cycloisomerase II, Chloromuconate Lactonizing Enzyme;
Ec: 5.5.1.7
Engineered: Yes
Organism_scientific: Pseudomonas Sp.
Organism_taxid: 65067
Strain: P51
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: I 4 2 2
R_factor 0.200 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
135.355 135.355 105.033 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand MN enzyme Isomerase E.C.5.5.1.7 BRENDA
related structures by homologous chain: 2CHR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of Pseudomonas P51 Cl-muconate lactonizing enzyme: co-evolution of structure and dynamics with the dehalogenation function., Kajander T, Lehtio L, Schlomann M, Goldman A, Protein Sci 2003 Sep;12(9):1855-64. PMID:12930985
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (1nu5.pdb1.gz) 472 Kb
  • LPC: Ligand-Protein Contacts for 1NU5
  • CSU: Contacts of Structural Units for 1NU5
  • Likely Quarternary Molecular Structure file(s) for 1NU5
  • Structure Factors (300 Kb)
  • Retrieve 1NU5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NU5 from S2C, [Save to disk]
  • Re-refined 1nu5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1NU5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NU5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NU5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nu5a2, region A:1-126 [Jmol] [rasmolscript] [script source]
        - Domain d1nu5a1, region A:127-369 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nu5_A] [1nu5]
  • SWISS-PROT database: [P27099]
  • Domain organization of [TCBD_PSESQ] by SWISSPFAM
  • Domain found in 1NU5: [MR_MLE ] by SMART
  • Other resources with information on 1NU5
  • Community annotation for 1NU5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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